ElShamah - Reason & Science: Defending ID and the Christian Worldview
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ElShamah - Reason & Science: Defending ID and the Christian Worldview

Welcome to my library—a curated collection of research and original arguments exploring why I believe Christianity, creationism, and Intelligent Design offer the most compelling explanations for our origins. Otangelo Grasso


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Proof of God in the Palm of Your Hand!

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1Proof of God in the Palm of Your Hand! Empty Proof of God in the Palm of Your Hand! Sun Feb 14, 2016 6:39 am

Otangelo


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Proof of God in the Palm of Your Hand!


https://reasonandscience.catsboard.com/t2306-proof-of-god-in-the-palm-of-your-hand

haha !! Finally, mainstream scientific papers " getting " it !!

Congrats to PLOS ONE !!

Biomechanical Characteristics of Hand Coordination in Grasping Activities of Daily Living

The explicit functional link indicates that the biomechanical characteristic of tendinous connective architecture between muscles and articulations is the proper design by the Creator to perform a multitude of daily tasks in a comfortable way.

http://journals.plos.org/plosone/article?id=10.1371%2Fjournal.pone.0146193

Proof of God in the Palm of Your Hand! Sem_tz46

Retraction


Following publication, readers raised concerns about language in the article that makes references to a 'Creator', and about the overall rationale and findings of the study.
Upon receiving these concerns, the PLOS ONE editors have carried out an evaluation of the manuscript and the pre-publication process, and they sought further advice on the work from experts in the editorial board. This evaluation confirmed concerns with the scientific rationale, presentation and language, which were not adequately addressed during peer review.
Consequently, the PLOS ONE editors consider that the work cannot be relied upon and retract this publication. The editors apologize to readers for the inappropriate language in the article and the errors during the evaluation process.


4 Mar 2016: The PLOS ONE Staff (2016) Retraction: Biomechanical Characteristics of Hand Coordination in Grasping Activities of Daily Living. PLoS ONE 11(3): e0151685. doi: 10.1371/journal.pone.0151685 View retraction



Abstract

Hand coordination can allow humans to have dexterous control with many degrees of freedom to perform various tasks in daily living. An important contributing factor to this important ability is the complex biomechanical architecture of the human hand. However, drawing a clear functional link between biomechanical architecture and hand coordination is challenging. It is not understood which biomechanical characteristics are responsible for hand coordination and what specific effect each biomechanical characteristic has. To explore this link, we first inspected the characteristics of hand coordination during daily tasks through a statistical analysis of the kinematic data, which were collected from thirty right-handed subjects during a multitude of grasping tasks. Then, the functional link between biomechanical architecture and hand coordination was drawn by establishing the clear corresponding causality between the tendinous connective characteristics of the human hand and the coordinated characteristics during daily grasping activities. The explicit functional link indicates that the biomechanical characteristic of tendinous connective architecture between muscles and articulations is the proper design by the Creator to perform a multitude of daily tasks in a comfortable way. The clear link between the structure and the function of the human hand also suggests that the design of a multifunctional robotic hand should be able to better imitate such basic architecture.

The reaction ?
http://retractionwatch.com/2016/03/02/hands-are-the-proper-design-by-the-creator-plos-one-paper-suggests/

Notification from PLOS Staff

http://journals.plos.org/plosone/article/comment?id=info%3Adoi%2F10.1371%2Fannotation%2F234ef7cc-d89a-4a9e-92d6-9070b175620d

The article should be retracted and the handling editor should be dismissed.

If the experimental results are solid, then the authors should be given an opportunity to remove the questionable statements and Republish with an erratum. The creationist conclusion does not appear to be critical to the interpretation of the study.

I think that pretending to defend a creationist argument (non-science) in a science journal raises serious doubts about the whole enterprise.

In this case I am ashamed that the journal staff, the editor responsable for the paper, the reviewers, all ignored this more than obvious red flag resulting on a creationist argument embedded on a scientific paper.

They should be ashamed of such a discriminating attitude.

As others have noted, utilization of an intelligent design creationism framework for explaining human anatomy is not acceptable for a scientific journal.

I find the use of religious language in a scietific paper totally unacceptable.

Paper on PLOS ONE creates a firestorm by referencing "the Creator"

http://phys.org/news/2016-03-paper-plos-firestorm-referencing-creator.html

March 4, 2016 by Bob Yirka report


Proof of God in the Palm of Your Hand! 1-sciencealumn

Credit: PLOS ONE
A trio of researchers from China has caused a stir in the technical publishing arena by including some verbiage in a paper published in the open-source journal PLOS ONE that appears to mention creationism as a part of their scientific endeavor. Due to an extremely negative response, PLOS ONE has retracted the article.


At its core, the paper is a report on an examination the researchers conducted of the human hand—how it is that it is so dexterous and offers so much freedom of control, etc. But in their abstract, they included these words: "…is the proper design by the Creator…"

The mention of "the Creator" has been interpreted by many as an allusion to God and creationism, which most in the scientific community see as scientifically invalid. Many have taken to social media to voice their displeasure regarding the apparent "mistake" by the editors, some suggesting that it appeared that the paper had not been peer-reviewed as is supposed to be the case with PLOS ONE, which adds credence to arguments suggesting open-access sites are not offering readers the same degree of quality as pay-wall sites. Others suggest that it might perhaps have been nothing more than a language problem—the authors and editors of the paper are all native Chinese speakers, and indeed, a report suggests that the authors meant to use a synonym for "nature" but somehow found "creator" instead.

Thus far, most media outlets have sided with the outraged readership, insisting that such papers have no place in the science arena, though some have joked about the pitchfork mentally of the virtual mob, looking for proper vengeance. What appears to be still missing, however, are the few small voices that find such outrage by science fanatics as ominous; those that call for the persecution of heretics like people of a former time; or those noting that many papers are published in respected journals that rely to some degree on improbable reasoning—Einstein and his "spooky action at a distance," for example. And other papers make their points by citing the existence of dark matter or dark energy as possible explanations for whatever they are studying, which for now at least, must be taken on faith.



Intelligent design makes it into Plos One
http://pandasthumb.org/archives/2016/03/intelligent-des-50.html

Paper that says human hand was 'designed by Creator' sparks concern
http://www.nature.com/news/paper-that-says-human-hand-was-designed-by-creator-sparks-concern-1.19499

Mob with Pitchforks Forms as Science Journal PLOS ONE Acknowledges "Proper Design by the Creator"

http://www.evolutionnews.org/2016/03/mob_with_pitchf102658.html

Panne bei Fachblatt: Forscher erklären menschliche Hand zum Werk Gottes

http://www.spiegel.de/wissenschaft/mensch/panne-bei-plos-one-menschen-hand-soll-werk-gottes-sein-a-1080718.html

Scientific paper credits ‘the Creator’ for human hand design
http://creation.com/hand-design-peer-review

Journal is forced to retract after outcry


Proof of God in the Palm of Your Hand! Hands

freeimages.com

Controversy is raging after a peer-reviewed open-access scientific journal, PLOS ONE, published a paper1 recently by a team of four Chinese researchers (three in China, one in Massachusetts).2 The paper dealt with everyday topics such as how human hands grasp objects, and showed these actions that we take for granted require “complex biomechanical architecture”. But this would hardly have been controversial if not for its ‘unfortunate’ use of some extremely taboo language: the researchers in multiple places referred to the Creator. E.g., the Abstract states:
The explicit functional link indicates that the biomechanical characteristic of tendinous connective architecture between muscles and articulations is the proper design by the Creator to perform a multitude of daily tasks in a comfortable way.1
The Introduction includes:
Thus, hand coordination affords humans the ability to flexibly and comfortably control the complex structure to perform numerous tasks. Hand coordination should indicate the mystery of the Creator’s invention.1

Backlash!

The public outcry was swift and fierce! One editor at the journal posted, “Just found out @PLOSONE published a paper with ‘evidence’ about some ‘creator’. If not retracted immediately, I will resign as editor.” Buckling to the pressure, the journal did exactly that shortly afterward, with the following statement:
In light of the concerns identified, the PLOS ONE editors have decided to retract the article, the retraction is being processed and will be posted as soon as possible. We apologize for the errors and oversight leading to the publication of this paper.3
Perhaps even sadder than the public response to this paper, however, was that even the authors of the paper themselves seem to have backed down. They attempted to blame references to the Creator on errors in translation, rather than a belief in intelligent design. E.g. the first author wrote in the Comments:
We are sorry for drawing the debates about creationism. Our study has no relationship with creationism. English is not our native language. Our understanding of the word ‘Creator’ was not actually as a native English speaker expected. Now we realized that we had misunderstood the word ‘Creator’. What we would like to express is that the biomechanical characteristic of tendious connective architecture between muscles and articulations is a proper ‘design’ by the ‘nature’ (result of evolution) to perform a multitude of daily grasping tasks. We will change the ‘Creator’ to ‘nature’ in the revised manuscript. We apologize for any troubles may have caused by this misunderstanding.1
But one must wonder if they really mean this, as even one of their critics responded:
We would take this defense seriously if it were the only creationist phrase in the article. But it isn’t. You also talk about hand coordination as evidence of “the mystery of the Creator’s invention.” What mystery is that? Is there a mystery how evolution by natural selection could produce the coordination in question?1
Perhaps they don’t want to be blacklisted from ever being published again?

Fallacy: “Why don’t creationists publish in peer reviewed journals?”

Misotheists and their churchian allies (‘useful idiots’), when they can’t refute a creationist argument, often taunt biblical creationists (and Intelligent Designtheorists) with the following challenge:
If there’s really good evidence for Design, then why don’t you submit papers to a secular peer-reviewed scientific journal and gain the support of the mainstream scientific community?
This incident should serve as a perfect response to any such challenge, and a ‘test case’ for what happens in such a circumstance. Far from giving due consideration, the so-called scientific community does the exact opposite: they scorn and bully anyone who would dare attempt to suggest a Creator, and do their best to prevent any such evidence from seeing the light of day. There would be pressure to remove any editor who allowed this to be published.
This is the same type of behavior documented in Ben Stein’s movie Expelled, as well as the book Slaughter of the Dissidents by Dr Jerry Bergman. The simple truth is, the secular academic world is not open to considering evidence for a Divine Creator. The very concept of intelligent design is anathema to them, and they will stop at nothing to prevent any hint of such a Creator from breaking through the pages of secular scientific literature. The oft-cited ‘amazing admission’ by Dr Richard Lewontin once again is relevant here.

The Hand: evidence for design

In reality, the human hand is great evidence for the design of our Creator. For those who have not stubbornly rejected the truth, this simple fact seems obvious! One calls to mind the revulsion of Charles Darwin himself upon viewing the beauty of a peacock feather,4 which he knew he could not explain away by naturalistic means.5 I wonder– do today’s misotheists, such as the editor atPLOS ONE who threatened to resign his position over the mere mention of a ‘Creator’, experience a similar revulsion at the sight of their own hands?

https://realtruth.org/articles/091207-003-science.html

Sir Isaac Newton once said, “In the absence of any other proof, the thumb alone would convince me of God’s existence.” How is this possible?

Proof of God in the Palm of Your Hand! Hand_print-apha-091208

The question of how the universe began and living creatures came to be is the subject of intense debate. Atheist cosmologists believe the universe popped into existence out of nothing—the result of a “quantum fluctuation” that occurred by chance. Atheist biologists say that life, in all of its variety and complexity, evolved from non-living matter by chance.
To them, chance is the god of atheism, and evolution is the handmaiden of chance.
According to the theory of evolution, over a billion years ago, life began in a primordial soup. Over time, “higher” (more complex) life forms “evolved” from “lower” (less complicated) forms by an unguided process of natural selection and random genetic changes, called mutations. Natural selection supposedly “chose” mutations better suited for survival, ultimately producing all living creatures.
After decades of nearly unchallenged supremacy, this view of reality is under serious attack. Discoveries in fields as diverse as biochemistry and astrophysics portray a finely tuned universe containing amazingly complex life forms. These discoveries have cast much doubt on the assertion that the universe exists by chance and that life randomly evolved from non-living matter.
Not surprisingly, despite mounting evidence to the contrary, atheists still defend evolution with a ferocity that casts them more as cheerleaders for their cause than impartial seekers of truth. They simply will not accept that, “In the beginning, God created the heavens and the earth” (Gen. 1:1).
In contrast to the mantra of atheism, the explanation offered by people of faith is that God created the universe and all life forms on Earth. As expressed in the Bible, man was created not by a lengthy process of evolution, but rather, “the Lord God formed man of the dust of the ground, and breathed into his nostrils the breath of life; and man became a living soul” (Gen. 2:7).
From the order and complexity found in the universe and in living creatures, philosophers and theologians reach the conclusion that God exists. This is known as the design argument. As the writer of the book of Psalms expressed it, “The heavens declare the glory of God; and the firmament shows His handiwork” (Psa. 19:1).
In the book of Romans, the apostle Paul expresses the argument as follows: “For the invisible things of Him from the creation of the world are clearly seen, being understood by the things that are made, even His eternal power and Godhead; so that they are without excuse” (Rom. 1:20).
Evidence of design can be found as far away as the most distant stars, and as close as the palm of your hand. Familiar and seemingly simple, the human hand is a marvel of functional utility and complexity that provides powerful evidence for the existence of God.

Anatomy of the Human Hand

The hand consists of 27 bones, including eight in the wrist, five in the palm, and 14 in the fingers and thumb. The narrow wrist bones form two rows of four bones that fit into a socket in the forearm bones. The hand moves by a sophisticated and coordinated relationship between bone, muscle, tendons, nerves and the brain.
Bones have no power to move themselves; they are moved by muscular exertion through tough cord-like fibers called tendons. One end of a tendon comes from the end of a muscle. The other end attaches to a bone.
Tendons attach the muscles of your forearm to the bones of your fingers. When the brain signals muscles in the arm, wrist and hand to move the hand, some muscles contract while others relax. Extensor muscles straighten the fingers. Flexors permit the fingers to bend and grip. The thumb has two flexors that help us to hold objects.
In comparison to primates (such as great apes or monkeys), humans have a longer opposable thumb. Partly because of this appendage, humans have a greater ability to manipulate and firmly grasp objects of various shapes.
“Compared to animals, human behavior with hand tools is fundamentally distinct. Exclusive elements of hand movement are attained only when the unique human hand’s muscular configuration and the brain’s disproportionately large hand sensory and motor function centers are integrated together” (Randy R. Guliuzza, Made in His Image: The Connecting Power of Hands).
The human primary motor cortex in the brain (which controls voluntary movements) is four times larger than a chimpanzee’s.

Robotics

Despite all of the advances in engineering and computer technology, the development of a robotic hand that is as dexterous as a human hand still exceeds the grasp of modern science.
“‘A robotic hand which can perform tasks with the dexterity of a human hand is one of the holy grails of science,’ said Dr Honghai Liu, who lectures [about] artificial intelligence at the [Portsmouth] University Institute of Industrial Research. The Institute specialises in artificial intelligence including intelligent robotics, image processing and intelligent data analysis.” He adds, “Nothing which exists today even comes close” (ScienceDaily).
What is so amazing, so complex, about the human hand that makes it difficult for scientists and engineers to effectively replicate it in a robot or mechanical device of some kind?
Finger Movements: The astounding dexterity of human fingers is made possible primarily by the coordinated actions of seven muscles that control the index finger, five muscles unique to the thumb, and three other muscles that move the little finger.
Doctor Randy Guliuzza, national representative of the Institute for Creation Research, notes that neuromuscular control of the hand is so optimized that using your fingertips, you can “squeeze to crack an egg with about ten pounds of force and abruptly stop within the distance of the shell’s thickness—about 1/100 of an inch.” He adds, “Evidence shows that the central nervous system predicts the best outcome of every finger movement several movements ahead of its current state.”
An example provided by Dr. Guliuzza illustrates the point: “…skilled typists will visually process up to eight characters in advance and then—in anticipation—the forward plan for muscle movements will commit the finger muscles to an action about three characters in advance of actually striking the keys. Times between keystrokes are commonly as low as 60 milliseconds. Interestingly, speed is fastest if successive keystrokes are between fingers on opposite hands.”
“Thinking” Tendons: The bulky muscles that move the hand and fingers are located in the forearm, where they do not impede the dexterity of the fingers. The power of those muscles is transmitted to the hand through a complex network of tendons. For years, doctors and scientists believed that the central nervous system alone controlled muscle movements. Recently, however, researchers have learned otherwise.
A 2007 article authored by scientists with the Neuromuscular Biomechanics Laboratory at Cornell University stated, “Current thinking attributes information processing for neuromuscular control exclusively to the nervous system. Our cadaveric experiments and computer simulations show, however, that the tendon network of the fingers performs logic computation to preferentially change torque production capabilities [the power to rotate or twist].”
Carefully follow this next quote. What computer models and studies on cadavers have shown is “that the distribution of input tensions in the tendon network itself regulates how tensions propagate to the finger joints, acting like a switching function of a logic gate that nonlinearly enables different torque production capabilities” (ibid.).
The authors go on to state, “Moreover, this form of information processing at the macroscopic scale is a new instance of the emerging principle of nonneural ‘somatic logic’ found to perform logic computation such as in cellular networks.” They add that their “results highlight the biomechanical uniqueness and versatility of human fingers by showing that the nervous system and tendon network work synergistically to reach different regions of torque actuation” (ibid.).
What this technical language tells us is that the tendons connecting muscles to our fingers perform “logic computations” that actually regulate the degree of tension in fingers, and permit “a rich repertoire of finger joint [movement] not possible with simpler tendon paths” (Journal of Neurophysiology).
This research raises a question: Is this degree of complexity the result of blind chance and random mutation over millions of years, or does it make more sense to conclude that the hand was created “as is” by God?
Grip Strength: Human grip strength is powerful evidence of design. The hand is structured such that it is capable of three basic grips: crushing, pinching and supporting.
According to the Institute for Creation Research, “Gripping involves three tendencies for the hand to twist on an axis, and six mechanical variables for each finger. Thanks to the sophistication of the hand/brain relationship and the size of brain capacity, grip combinations are nearly infinite and amazingly versatile.”
Researchers at the University of Wisconsin-Milwaukee found that on average, adult males between the ages of 20 and 24 generate 121 pounds of “crushing” grip strength (similar to a handshake) in their right hands, and women in that same age group had 70.4 pounds of grip strength in their right hand (Archives of Physical Medicine and Rehabilitation).
But that does not even begin to describe the level of strength that human hands are capable of demonstrating. Over the centuries, the strongest of men have performed amazing feats of hand strength, including Samson, who slew a thousand men with the jawbone of a donkey (Judg. 15:16).
However, extraordinary grip strength is not necessary for mankind to fulfill the will of God. The hand strength of ordinary people is sufficient for them to engage in all those activities necessary to honor God and enjoy life as He intended.
Was this a chance occurrence?

The Marvel of the Human Hand

In his book Fearfully and Wonderfully Made, Dr. Paul Brand, who was one of the foremost hand surgeons in the world, testifies to the wonder—the miracle—of the human body.
Dr. Brand explained that although many people think that fat serves no significant purpose, it does on the hand.
“Underneath the skin in the palm of the hand lie globules of fat with the look and consistency of tapioca pudding. Fat globules, so soft as to be almost fluid, cannot hold their own shape, and so they are surrounded by interwoven fibrils of collagen, like balloons caught in a supporting rope net…where stress occurs, such as on the palm of the hand, fat is tightly gathered and enveloped by fibrous tissue in a design resembling fine Belgian lace.”
When you grasp a hammer in the palm of your hand, each “cluster of fat cells changes its shape in response to the pressure. It yields but cannot be pushed aside because of the firm collagen fibers around it. The resulting tissue, constantly shifting and quivering, becomes compliant, fitting its shape and its stress points to the precise shape of the handle of the hammer. Engineers nearly shout when they analyze this amazing property, for they cannot design a material that so perfectly balances elasticity with viscosity.”
The skin of the hand is also well suited to the task of gripping and handling different kinds of objects.
Dr. Brand wrote, “If my skin tissue had been made harder, I might insensitively crush a goblet of fine crystal as I hold it in my hand; if softer, it would not allow a firm grip.”
The structure of human bones also reflects design.
“In 1867, an engineer demonstrated that the arrangement of bone cells forms the lightest structure, made of least material, to support the body’s weight. No one has successfully challenged his findings” (ibid.).
Although people take bone healing for granted, it is remarkable that “the skeleton is a growing organ. When I cut bone, it bleeds. Most amazing of all, when it breaks, it heals itself” (ibid.).
Another remarkable feature of a normal hand is its sensitivity. Dr. Brand states, “A normal hand can distinguish between a smooth plane of glass and one etched with lines only 1/2500 of an inch deep.” The fingertips have the ability to detect a difference of just three milligrams.
How extraordinary it is that the hand should be so well-suited for its purpose through all of these amazing features and abilities. Was this the product of chance or the creation of God?

Fingerprints Designed by God

What about fingerprints? If God designed the human hand, why do we have fingerprints? Do they perform a function, and if not, then why would God have created us with them?
Julien Schiebert and his colleagues at the Laboratoire de Physique Statistique de l’Ecole Normale Supérieure in Paris have demonstrated that our fingerprints help us to feel objects through vibrations.
As you move your fingers across a surface, you trigger vibrations that are picked up by nerves. Some of these nerves (called Pacinian corpuscles) are embedded relatively deep (about two millimeters under your skin). Yet, our sense of touch is so refined that we can feel texture differences as small as the width of a human hair, about 200 micrometers. Scientists have wondered how deeply embedded nerves could detect the subtle vibrations involved in the perception of fine differences in textures.
Using robotic fingertips designed to detect tactile information, French scientists discovered that the small ridges on the surface of our fingers (fingerprints) amplify and filter vibrations, which help transmit them to the deeply embedded nerves.
How much do fingerprints enhance our ability to detect tactile differences? Do they double it? Triple it? Scientists found that the vibrations from a patterned fingertip were 100 times stronger than vibrations from a smooth fingertip.
Thanks to fingerprints, our sense of touch is 100 times better than it would be if the surface of our fingers was smooth!
Researchers determined that fingerprints only do their vibration-filtering job when the finger is moving perpendicular (at right angles) to the fingerprint ridges. This means that if fingerprints all ran in one direction, filtering would only occur when fingers moved at right angles to the ridges. But because of the swirl and loop pattern of human fingerprints, every direction of movement activates filtering properties.
What about the fact that fingerprint patterns vary from person to person?
According to the leading researcher of the study, G. Debrégeas, “The nice thing is that pattern doesn’t matter. The distinctiveness of fingerprint patterns from one person to the next doesn’t seem to have an effect on filtering capabilities” (Science).

Problems with Evolution

The hand and its various functions provide much evidence in support of the belief that life was created by God. But is there evidence which is directly at odds with the theory that life evolved by chance?
In his book What Is Creation Science? biologist Gary Parker writes, “Using descent from a common ancestor to explain similarities is probably the most logical and appealing idea that evolutionists have. Isaac Asimov, well known science fiction writer, is so pleased with the idea that he says our ability to classify plants and animals on a groups-within-groups hierarchical basis virtually forces scientists to treat evolution as ‘a fact.’ In his enthusiasm, Asimov apparently forgot that we can classify kitchen utensils on a groups-within-groups basis, but that hardly forces anyone to believe that knives evolved into spoons, spoons into forks, or saucers into cups and plates.”
Evolutionist William Fix explains in The Bone Peddlers: Selling Evolution: “The older text-books on evolution make much of the idea of homology, pointing out the obvious resemblances between the skeletons of the limbs of different animals. Thus the ‘pentadactyl’ limb pattern is found in the arm of a man, the wing of a bird, and the flipper of a whale, and this is held to indicate their common origin. Now if these various structures were transmitted by the same gene-complex, varied from time to time by mutations and acted upon by environmental selection, the theory would make good sense. Unfortunately this is not the case. Homologous organs are now known to be produced by totally different gene complexes in the different species. The concept of homology in terms of similar genes handed on from a common ancestor has broken down.”
Thus, to believe in evolution, one would have to believe that separate gene complexes for each of these “similar” limbs all evolved independently by chance. The improbability of evolution is increased beyond comprehension, in light of the greater improbability that not one, but multiple separate gene complexes would have to have evolved independently.

Proteins and Evolution

The growth and functioning of muscles, including those that move the human hand, depend on proteins.
Did they evolve by chance?
A protein called titin (also known as connectin) is involved in the contraction of striated muscles, such as those in the human forearm which move fingers and generate grip strength. The diversity in the kind and function of proteins results from differences in the number and sequencing of amino acids. Like all proteins, titin is composed of a specific chain of amino acids. The average amino acid chain contains between 300 and 400 amino acids. Titin, the largest protein in the body, is made up of 34,350 amino acids.
Proteins must have the precise shape to accomplish their specific function or functions in the cell. A slight variation in the correct shape of the protein molecule type is detrimental for the cell.
Why should we think that these various amino acid chains did not just evolve?
The answer to that question is provided in part by Cambridge University educated Philosopher of Science, Dr. Stephen C. Meyer in Signature in the Cell: DNA and the Evidence for Intelligent Design.
Dr. Meyer explains that to form a protein, amino acids must link together by forming a particular chemical bond known as a peptide bond. Otherwise, the amino acids will not fold into proteins. The probability of building a chain of 150 amino acids in which all linkages are peptide bonds is estimated to be 1 in 10 to the 45th power (for the sake of perspective, 10 to the 2nd power is 100, 10 to the 3rd is 1000).
In nature, there are both “left-handed” (L-forms) and “right-handed” amino acids. Each of these two types is produced with roughly equal frequency. A protein will not function unless all of its amino acids are left-handed. The odds that all of the amino acids in a peptide bond chain of 150 amino acids will be “left-handed” are also about 1 in 10 to the 45th power. Thus, the chances of forming a 150 amino acid chain in which all of the bonds are peptide bonds and all of the amino acids are L-forms is roughly 1 chance in 10 to the 90th power.
Proteins will not function unless they fold into stable structures. Among all possible amino acid sequences of 150 amino-acids in length, only 1 in 10 to the 74th power is capable of folding into a stable structure. This means that a random process will result in a functional protein about one time in every 10 to the 74th attempts.
Taking all of this together, the odds of a 150-amino-acid compound randomly assembling into a functional protein in a prebiotic soup is equal to the probability of having only peptide bonds (1 in 10 to the 45th), times the probability of only left-handed amino acids (1 in 10 to the 45th) times the probability of correct amino acid sequencing (1 in 10 to the 74th). The result is 1 in 10 to the 164th power, meaning that the odds of a 150-amino-acid compound randomly assembling into a functional protein in a prebiotic soup is 1 in 10 to the 164th power. How big is 10 to the 164th power?
Dr. Meyer says that the total number of all protons, neutrons and electrons in the entire observable universe is 1 in 10 to the 80th power! And if that is not unlikely enough to cast doubt on the evolution of protein, consider that the analysis above was for a protein chain containing 150 amino acids. By comparison, titin, comprised of 34,350 amino acids, is significantly more complex and thus far less likely to have formed by chance than the 150 amino-acid protein considered in the example.
To put this in perspective, the odds of being struck by lightning during your lifetime are 1 in 600,000 while your odds of being struck twice are 1 in 360 billion. Further, the likelihood of your house being hit by a meteor is 1 in 182 trillion—still a miniscule number compared to the chance that proteins evolved!

Undeniable Proof

The human hand attests to the existence of the God who created heaven and Earth, and to His love for mankind. Each and every aspect of the hand serves a purpose, and each of its parts work in concert to produce what modern science cannot—an incredible combination of fluidity, strength, sensitivity and dexterity. The progress of science brings greater awareness of an extraordinary complexity that random processes did not—and could never—produce. To say otherwise is to deny the dictates of common sense and rob God of the glory that is His due.

The pentadactyl pattern and common descent

http://reasonandscience.heavenforum.org/t1666-failed-evolutionary-predictions?highlight=predictions

The pentadactyl structure—five digits (four fingers and a thumb for humans) at the end of the limb structure—is one of the most celebrated proof texts for evolution. The pentadactyl structure is found throughout the tetrapods and its uses include flying, grasping, climbing and crawling. Such diverse activities, evolutionists reason, should require diverse limbs. There seems to be no reason why all should need a five digit limb. Why not three digits for some, eight for others, 13 for some others, and so forth? And yet they all are endowed with five digits. As Darwin explained, “What can be more curious than that the hand of a man, formed for grasping, that of a mole for digging, the leg of the horse, the paddle of the porpoise, and the wing of the bat, should all be constructed on the same pattern, and should include similar bones, in the same relative positions?” (Darwin, 382)
 
Such a suboptimal design must be an artefact of common descent—a suboptimal design that was handed down from a common ancestor rather than specifically designed for each species. And the common descent pattern formed by this structure is often claimed as strong evidence for evolution. (Berra, 21; Campbell et. al., 509; Futuyma, 47; Johnson and Losos, 298;  Johnson and Raven, 286; Mayr, 26) One text calls it a “classic example” of evolutionary evidence. (Ridley, 45)
 
But this prediction is now known to be false as the digit structure in the tetrapods does not conform to the common descent pattern. In fact, appendages have various digit structures and they are distributed across the species in various ways. This is found both in extant species and in the fossil record. As evolutionist Stephen Jay Gould explained, “The conclusion seems inescapable, and an old ‘certainty’ must be starkly reversed.” (Gould)
 
This means that evolutionists cannot model the observed structures and pattern of distribution merely as a consequence of common descent. Instead, a complicated evolutionary history is required (Brown) where the pentadactyl structure re-evolves in different lineages, and appendages evolve, are lost, and then evolve again. And as one recent study concluded, “Our phylogenetic results support independent instances of complete limb loss as well as multiple instances of digit and external ear opening loss and re-acquisition. Even more striking, we find strong statistical support for the re-acquisition of a pentadactyl body form from a digit-reduced ancestor. … The results of our study join a nascent body of literature showing strong statistical support for character loss, followed by evolutionary re-acquisition of complex structures associated with a generalized pentadactyl body form.” (Siler and Brown)
 
References
 
Berra, Tim. 1990. Evolution and the Myth of Creationism. Stanford: Stanford University Press.

Brown, R., et. al. 2012. 
Species delimitation and digit number in a North African skink. Ecology and Evolution 2:2962-73.


Campbell, Neil, et. al. 2011. Biology. 5th ed. San Francisco: Pearson.
 
Darwin, Charles. 1872. The Origin of Species. 6th ed. London: John Murray.
http://darwin-online.org.uk/content/frameset?itemID=F391&viewtype=text&pageseq=1
 
Futuyma, Douglas. 1982. Science on Trial: The Case for Evolution. New York: Pantheon Books.
Gould, Steven Jay. 1991. “Eight (or Fewer) Little Piggies.” Natural History 100:22-29.
Johnson, G., J. Losos. 2008. The Living World. 5th ed. New York: McGraw-Hill.
Johnson, G., P. Raven. 2004. Biology. New York: Holt, Rinehart and Winston.
Mayr, Ernst. 2001. What Evolution Is. New York: Basic Books.
Ridley, Mark. 1993. Evolution. Boston: Blackwell Scientific.

Siler C., R. Brown. 2011. “Evidence for repeated acquisition and loss of complex body-form characters in an insular clade of Southeast Asian semi-fossorial skinks.” Evolution 65:2641-2663.



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2Proof of God in the Palm of Your Hand! Empty Re: Proof of God in the Palm of Your Hand! Fri Mar 04, 2016 11:26 am

Otangelo


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Paper that says human hand was 'designed by Creator' sparks concern

http://www.nature.com/news/paper-that-says-human-hand-was-designed-by-creator-sparks-concern-1.19499

The PLOS ONE staff may not have acknowledged yet, but ID theory is gaining ground in the last 3 decades:

Intelligent design theories gaining steam in scientific circles 

http://reasonandscience.heavenforum.org/t2282-intelligent-design-theories-gaining-steam-in-scientific-circles

The scientific endaveour has not brought us the ample and wide confirmation of Darwins theory of evolution, nor to the overwhelming conclusion that natural forces alone explain our existence. Rather than that, the gap is widening more the more time pasts, and rather than explaining natural phenomenas through naturalism, the end of the road is a big question mark, and unanswered questions. 

Open questions in biology, biochemistry, and evolution

http://reasonandscience.heavenforum.org/t2299-open-questions-in-biology-biochemistry-and-evolution

A reflection of the foundation of what science is, and what propositions should be permitted, and which not, may be well applied. 

http://www.ise.ox.ac.uk/__data/assets/pdf_file/0017/9512/naturalism_science_supernatural.pdf

There is overwhelming agreement amongst naturalists that a naturalistic ontology should not allow for the possibility of supernatural entities. I argue, against this prevailing consensus, that naturalists have no proper basis to oppose the existence of supernatural entities. Naturalism is characterized, following Leiter and Rea, as a position which involves a primary commitment to scientific methodology and it is argued that any naturalistic ontological commitments must be compatible with this primary commitment. It is further argued that properly applied scientific method has warranted the acceptance of the existence of supernatural entities in the past and that it is plausible to think that it will do so again in the future. So naturalists should allow for the possibility of supernatural entities.

I might add that i personally would not go that far. I would imho rather point out that there is no reason to permit only natural explanations into scientific publications :

Richard Lewontin, Billions and billions of demons, The New York Review, p. 31, January 9, 1997

We take the side of science in spite of the patent absurdity of some of its constructs, in spite of its failure to fulfil many of its extravagant promises of health and life, in spite of the tolerance of the scientific community for unsubstantiated just-so stories, because we have a prior commitment, a commitment to materialism. It is not that the methods and institutions of science somehow compel us to accept a material explanation of the phenomenal world, but, on the contrary, that we are forced by our a priori adherence to material causes to create an apparatus of investigation and a set of concepts that produce material explanations, no matter how counter-intuitive, no matter how mystifying to the uninitiated. Moreover, that materialism is absolute, for we cannot allow a Divine Foot in the door.

There are two possible causal agents for natural phenomena, that is , a intelligent agency, and a " natural " agency. There is no justification to apply a pressupositional stance that only natural mechanisms should be permitted, and design inferences excluded a priori. 

I encourage the PLOS ONE stuff to think about the situation , and pioneer a healthy debate about the foundation of modern science.

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Otangelo


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http://journals.plos.org/plosone/article/comment?id=info%3Adoi%2F10.1371%2Fannotation%2F234ef7cc-d89a-4a9e-92d6-9070b175620d

Otangelo Grasso is a Brazilian creationist. He is not a scientist but a real estate agent. His knowledge about science is the same which my dog has. Simply ignore this person.
Competing interests declared: I am a scientist and Otangelo is not.


RE: RE: RE: RE: RE: RE: Notification from PLOS Staff


Otangelo1 replied to pcorgo on 05 Mar 2016 at 21:06 GMT


Paulo Henrique
i am not brazilian. I am Swiss/italian, living in brazil. 
Secondly, what i am, and my education, is as matter of fact, irrelevant . 
Third , if you wish to make a point , how about starting , answering this : 

Why is there no outrageous reaction, when mainstream scientific papers about origins in their abstract take natural mechanisms, in special evolution, a priori, as a granted fact ? When however as shown in the paper in question the authors mention a Creator, and take his creative power as a fact, a outrageous crowd starts a shitstorm, and the uncommon event takes it even to be mentioned in the mainstream press, as brazilan veja, german Der Spiegel, and probably many other papers ? 

Why the double standard ? 

From a article i wrote recently:

http://reasonandscience.h...

Jeff Dodick writes: 7

Despite the still-regnant concept of science proceeding by a monolithic ?Scientific Method?, philosophers and historians of science are increasingly recognizing that the scientific methodologies of the historical sciences (e.g., geology, paleontology) differ fundamentally from those of the experimental sciences (e.g., physics, chemistry). This new understanding promises to aid education, where currently students are usually limited to the dominant paradigm of the experimental sciences, with little chance to experience the unique retrospective logic of the historical sciences. A clear understanding of these methodological differences and how they are expressed in the practice of the earth sciences is thus essential to developing effective educational curricula that cover the diversity of scientific methods. 

And Ann Gauger uses the same line of reasoning, when she writes:

Defenders of methodological naturalism often invoke definitional or "demarcation criteria" that say that all science must be observable, testable, falsifiable, predictive, and repeatable. Most philosophers of science now dismiss these criteria because there are too many exceptions to the rules they establish in the actual practice of science. Not all science involves observable entities or repeatable phenomena, for example --you can't watch all causes at work or witness all events happen again and again, yet you can still make inferences about what caused unique or singular events based on the evidence available to you. Historical sciences such as archeology, geology, forensics, and evolutionary biology all infer causal events in the past to explain the occurrence of other events or to explain the evidence we have left behind in the present. For such inference to work, the cause invoked must now be known to produce the effect in question. It's no good proposing flying squirrels as the cause of the Grand Canyon, or a silt deposit as the cause of the Pyramids. Squirrels don't dig giant canyons or even small ones, and silt doesn't move heavy stone blocks into an ordered three-dimensional array. However, we know from our experience that erosion by running water can and does produce gullies, then arroyos, and by extension, canyons. We know that intelligent agents have the necessary design capabilities to envision and build a pyramid. No natural force does. These are inferences based on our present knowledge of cause and effect or "causes now in operation." The theory of intelligent design also qualifies as historical science. We cannot directly observe the cause of the origin of life or repeat the events we study in the history of life, but we can infer what cause is most likely to be responsible, as Stephen Meyer likes to say, "from our repeated and uniform experience." In our experience the only thing capable of causing the origin of digital code or functional information or causal circularity is intelligence and we know that the origin of life and the origin of animal life, for example, required the production of just such things in living systems. Even though other demarcation criteria for distinguishing science from non-science are no longer considered normative for all branches of science, it is worth checking to see how well intelligent design fares using criteria that are relevant for an historical science. Briefly, although the designing agent posited by the theory of intelligent design is not directly observable (as most causal entities posited by historical scientists are not), the theory is testable and makes many discriminating predictions. Steve Meyer's book Signature in the Cell, Chapters 18 and 19 and Appendix A, discusses this thoroughly. 8

We can detect and make a distinction between the patterns and effects of a mind , and compare to the effects of natural causal agencies , physical and chemical reactions and interactions, and draw conclusions upon the results. Thats where ID kicks in, detecting design patterns, and test what is observed in the natural world, to see if they have signs of a intelligent causal agency, and compare the evidence with the efficiency of natural causes, to then, at the end, infer which explanation makes most sense, and fits best the evidence. So intelligent design does not try to test or to detect or to identify the designer, nor try to detect and test the action of creation, and neither is that required to detect design and infer it as the best explanation of origins, but examine the natural effects , and upon the results, draw inferences that can provide conclusions of the best explanation model for the most probable origin and cause of the physical parts. So the mere fact that a supernatural agent and its action cannot be scrutinized and observed directly and scientifically, does not disqualify ID as a scientific theory. 

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Otangelo


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Secularist Intolerance Against Scientific Paper That Briefly Mentions Creator

Intolerance against Christians’ freedom to express their Christian worldview is increasing from a minority of secularists who are in positions of authority regarding education, research, and so on.

What happens when you briefly reference the Creator (without even specifically explaining who this Creator is) in a scientific paper for a secular publication? Well, watch out, for intolerant secularists will become incensed and get it censored.

Four scientists, three from China and one from Massachusetts, recently published an article entitled “Biomechanical Characteristics of Hand Coordination in Grasping Activities of Daily Living” in the journal PLOS ONE. In their article they mentioned that “our study can improve the understanding of the human hand and confirm that the mechanical architecture is the proper design by the Creator for dexterous performance of numerous functions following the evolutionary remodeling of the ancestral hand for millions of years” (emphasis mine). Near the end of the paper, the researchers added, “Hand coordination should indicate the mystery of the Creator’s invention.” Now it’s even possible that the authors meant that nature (or evolution) was the Creator! Some people use such wording about nature/evolution.

When it became known that the word Creator was used, the outrage on the Internet and social media was swift and fierce. People bemoaned the “unacceptable,” “harmful disgrace,” “absolute joke,” and “sloppy job” of the editors and their journal for allowing this word to go through. Some secularists threatened to boycott the open-access journal, and some editors declared that they would resign if the article wasn’t retracted. The intolerance shown by the secularists over the use of the word Creator in the article was astonishing. The very idea that there could be an intelligence behind life was so unacceptable and was expressed with such anger that it only exposed how passionate they are in defending their secularist religion of humanism and naturalism.

The lead author of the paper, after he was contacted about the firestorm it was creating, reportedly said, “We are not native speakers of English, and entirely lost the connotations of some words such as ‘Creator.’ I am so sorry for that.” After discussion and thought, the journal decided to retract the article. We are not told what the authors were intending to communicate by their word choice of “Creator.”

It’s ironic that creationists are frequently accused of not being “real” scientists because they ”don’t publish in peer-reviewed journals” (of course by this common accusation they mean secular peer-reviewed journals), but this recent episode is a perfect example of why this often doesn’t happen! In their paper, these scientists made very brief mentions of a “Creator’s” design—in the same sentence mentioning evolution and millions of years—yet there was a very vocal demand that if this paper were not retracted, a boycott might be called. So it doesn’t matter how sound and well-researched your observational science is or how technical the paper might be, if it even dares to mention a word like Creator, it will be censored. There is such a massive intolerance in the scientific community today against anything that could possibly hint at life not arising by natural processes!

This is one reason that we need our Answers Research Journal, one of several technical, peer-reviewed journals where creationists can submit their articles to be possibly published. Many creationists are not allowed to publish in secular journals, regardless of the quality or soundness of their research and the author’s credentials, simply because what they write isn’t based on the religion of naturalism! It would immediately be declared “wrong”—regardless of the quality of the research—simply because it may be influenced by the Christian worldview instead of evolutionary naturalism.

Now this isn’t to say that creationists never publish in secular, peer-reviewed journals. Many of the scientists here at Answers in Genesis, such as Dr. Nathaniel Jeanson, Dr. Andrew Snelling, and Dr. Georgia Purdom, have all been published in secular journals because they do solid observational science. But in their articles they aren’t permitted to mention the Creator or that their starting point is God’s Word because their work would automatically be thrown out—regardless of the high quality observational science they present.

The intense prejudice and intolerance continually on display by secularists is almost unbelievable.
The intense prejudice and intolerance continually on display by secularists is almost unbelievable. And sadly it’s only increasing. They become up in arms about anything that mentions a creator and will immediately throw it out. And we see this attitude in our personal lives and the culture as a whole. Anyone who dares to think biblically about origins, the nature of marriage, or the sanctity of life is often treated with intolerance, anger, and prejudice, and faces ad hominin attacks—just for starting with God’s Word! And sadly, as our culture moves farther and farther from a biblical worldview, we can only expect this intolerance to continue.

We also saw a similar intolerance regarding the debate I had with Bill Nye “The Science Guy” in 2014. Many secularists openly admitted that they were against the debate because they didn’t want creationists to be able to present our teachings to the public. It’s the same reason atheist groups constantly attack the Creation Museum and Ark Encounter: they can’t tolerate Christians having such a public presence to present their message in a world where so many people have been brainwashed by the religion of naturalism. Secularists don’t want their monopoly on education and research being broken, and thus they resort to censorship.

Really, this outrage directed against PLOS ONE for printing this paper shows how utterly intolerant secularists are to anything even remotely Christian. They don’t want people to even hear any possibility of something that might support creation. They immediately have to be censors. Now, something is wrong with your worldview if you have to censor other views and not even let people hear the alternatives! Whatever happened to freedom of speech and freedom of religion? Secularists ultimately don’t want freedom of religion; they want freedom from Christianity.

As I wrote earlier, evolution is a religion. It’s a religion of naturalism and atheism (both of which are totally unprovable from an observational scientific standpoint, yet are held to ardently within much of academia by blind faith). According to secular, evolutionary thinking, if anything even hints at a creator, it must be thrown out because obviously there’s something wrong with it. This attitude boils down to what their starting point is—they start with the assumption that there is no creator and that everything happened by naturalistic processes, so it doesn’t matter what the quality of the research is; if it in any way supports a Creator God (and it doesn’t even seem to matter which creator; it doesn’t even have to be the God of the Bible), they throw it out. It’s not surprising then that public school science textbooks often define science as only having to do with natural processes—no supernatural is allowed. In other words, the religion of naturalism (which is in essence atheism) is being imposed on generations of students in government-run schools.

If secularists were to be honest, they would fully acknowledge that from their perspective, when they die, that’s it—they’re dead. Then why do they even fight so vehemently against God? Why do they care if someone mentions a creator in a research paper? What is it that irks them so much about this? Well, the bottom line is that they know that if there is a God who created them, and if He is the God of the Bible, then He owns them, He sets the rules, and they are accountable to Him. It means, for example, that marriage is one man for one woman, that abortion is murder, and so on.

Because the human heart does not want to submit to Christ, secularists actively suppress the truth in unrighteousness (Romans 1:18). Romans 1 makes it clear that God is clearly seen through what He has made (Romans 1:20). But instead of submitting to Him, people reject that truth and do everything they can to ignore His witness in nature and through His Word. Ultimately, it comes down to a heart issue!


https://answersingenesis.org/who-is-god/creator-god/secularist-intolerance-against-scientific-paper-briefly-mentions-creator/

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How evolution has equipped our hands with five fingers

A matter of evolution 1  Really ? 

We have known for several years that the limbs of vertebrates, including our arms and legs, stem from fish fins. The evolution that led to the appearance of limbs, and in particular the emergence of fingers in vertebrates, reflects a change in the body plan associated with a change of habitat, the transition from an aquatic environment to a terrestrial environment. How this evolution occurred is a fascinating question that goes all the way back to the work of Charles Darwin.

This August, researchers in Chicago, Dr. Neil Shubin and his team, demonstrated that two genes -- hoxa13 and hoxd13 -- are responsible for the formation of fin rays and our fingers. "This result is very exciting, because it clearly establishes a molecular link between fin rays and fingers," said Yacine Kherdjemil, a doctoral student in Marie Kmita's laboratory and first author of the article published in Nature.

However, the transition from fin to limb was not accomplished overnight. The fossil record indicates that our ancestors were polydactyl, meaning that they had more than five fingers, which raises another key question. Through what mechanism did evolution favor pentadactyly (five fingers) among current species?

One observation in particular caught the attention of Dr. Kmita's team: "During development, in mice and humans, the hoxa11 and hoxa13 genes are activated in separate domains of the limb bud, while in fish, these genes are activated in overlapping domains of the developing fin," said Marie Kmita, Director of the Institut de recherches cliniques de Montréal'S Genetics and Development research unit and Associate Research Professor in the Department of Medicine at the Université de Montréal.

In trying to understand the significance of this difference, Yacine Kherdjemil demonstrated that by reproducing the fish-type regulation for the hoxa11 gene, mice develop up to seven digits per paw, i.e., a return to ancestral status. Dr. Marie Kmita's team also discovered the sequence of DNA responsible for the transition between fish- and mouse-type regulation for the hoxa11 gene. "It suggests that this major morphological change did not occur through the acquisition of new genes but by simply modifying their activities," added Dr. Marie Kmita.

From a clinical point of view, this discovery reinforces the notion that malformations during fetal development are not only due to mutations in the genes and may come from mutations in sequences of DNA known as regulatory sequences. "At present, technical constraints do not allow for identifying this type of mutation directly in patients, hence the importance of basic research using animal models," said Marie Kmita.

Evolution of Hoxa11 regulation in vertebrates is linked to the pentadactyl state 2
Proof of God in the Palm of Your Hand! Hoxall10


1. https://www.sciencedaily.com/releases/2016/10/161005132654.htm
2. http://www.nature.com.ololo.sci-hub.cc/nature/journal/v539/n7627/full/nature19813.html

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